Genómica Evolutiva

En el Programa de Genómica Evolutiva estamos interesados en estudiar los mecanismos de evolución de las bacterias desde los puntos de vista de la biología molecular, de la biología de sistemas, y de la genómica. Estamos especialmente interesados en bacterias que pueden establecer interacciones simbióticas y patogénicas con otros organismos. Nuestro Programa se compone de cuatro grupos de investigación dirigidos por el Dr. Santiago Castillo, el Dr. Julio Freyre, el Dr. Víctor González y el Dr. Miguel Ángel Cevallos. Una de las labores más importantes de nuestro Programa es la formación de recursos humanos especialmente de doctores, dentro del programa de Ciencias Biomédicas de la UNAM. Sin embargo, apoyamos a todos los estudiantes de licenciatura que deseen realizar su tesis bajo la dirección de alguno de nosotros.

 

Académicos del Grupo

NombrePuestoCategoríaCorreoTeléfono
Miguel Ángel Carlos Cevallos GaosInvestigadorInv. Tit. C T.C. Definitivomac@ccg.unam.mx(777) 3114663
Víctor Manuel González ZúñigaInvestigadorInv. Tit. C T.C. Definitivovgonzal@ccg.unam.mx(777) 3133881
Santiago Castillo RamírezInvestigadorInv. Tit. B T.C. Definitivoiago@ccg.unam.mx(777) 3133881
Rosa Isela Santamaria GutiérrezTécnico AcadémicoTec. Acad. Tit. C T.C. Definitivorosa@ccg.unam.mx(777) 3133881
Virginia Patricia Bustos ArcosTécnico AcadémicoTec. Acad. Tit. C T.C. Definitivopaty@ccg.unam.mx(777) 3133881
María de los Angeles Pérez OsegueraTécnico AcadémicoTec. Acad. Tit. C T.C. Definitivoaperez@ccg.unam.mx(777) 3133881
Irma Martínez FloresTécnico AcadémicoTec. Acad. Tit. B T.C. Definitivoimartflo@ccg.unam.mx(777) 3291690
José Espíritu SalazarTécnico por honorariosUNAMspirit@ccg.unam.mx(777) 3291690
Mary Carmen Torres QuinteroPosdoctoralDGAPAmctorqui@ccg.unam.mx(777) 3133881
Marcela Sandoval VelascoInvestigadorInv. Tit. A T.C. Obra Det.msandovv@ccg.unam.mx(777) 3133881

Publicaciones del Grupo

AñoPublicaciónPMID
2024Mancilla-Rojano, J., Flores, V., Cevallos, M.A., Ochoa, S.A., Parra-Flores, J., Arellano-Galindo, J., Xicohtencatl-Cortes, J., Cruz-Córdova, A.. (2024). "A bioinformatic approach to identify confirmed and probable CRISPR-Cas systems in the Acinetobacter calcoaceticus - Acinetobacter baumannii complex genomes.". Frontiers in Microbiology. 15():-. [doi:10.3389/fmicb.2024.1335997]38655087
2024Castillo-Ramírez S. (2024). "On the road to genomically defining bacterial intra-species units.". mSystems. 9(7):-. [doi:10.1128/msystems.00584-24]38940600
2024Romero-Contreras YJ, Gonzalez-Serrano F, Formey D, Aragón W, Chacón FI, Torres M, Cevallos MÁ, Dib JR, Rebollar EA, Serrano M. (2024). "Amphibian skin bacteria display antifungal activity and induce plant defense mechanisms against Botrytis cinerea .". Frontiers In Plant Science. 15():1392637-1392637. [doi:10.3389/fpls.2024.1392637]38654899
2024Torres-Quintero, M.C., Santamaría, R.I., Martínez-Flores, I., Bustos, P., Girard, L., Cevallos, M.Á., Rodríguez-Sánchez, C., González, V.. (2024). "Role of core lipopolysaccharide biosynthetic genes in the infection and adsorption of broad-host-range bacteriophages of Rhizobium etli.". Microbiological Research. 285():-. [doi:10.1016/j.micres.2024.127766]38788349
2024Romero-Contreras YJ, González-Serrano F, Bello-López E, Formey D, Aragón W, Cevallos MÁ, Rebollar EA, Serrano M. (2024). "Bacteria from the skin of amphibians promote growth of Arabidopsis thaliana and Solanum lycopersicum by modifying hormone-related transcriptome response.". PLANT MOLECULAR BIOLOGY. 114(3):39-39. [doi:10.1007/s11103-024-01444-x]38615069
2024Bello-López, E., Pérez-Oseguera, Á., Santos, W., Cevallos, M.Á.. (2024). "A novel replication initiation region encoded in a widespread Acinetobacter plasmid lineage carrying a blaNDM-1 gene.". Plos One. 19(5):-. [doi:10.1371/journal.pone.0303976]38820537
2024Bello-López, E., Escobedo-Muñoz, A.S., Guerrero, G., Cruz-Córdova, A., Garza-González, E., Hernández-Castro, R., Zarain, P.L., Morfín-Otero, R., Volkow, P., Xicohtencatl-Cortes, J., Cevallos, M.A.. (2024). "Acinetobacter pittii : the emergence of a hospital-acquired pathogen analyzed from the genomic perspective.". Frontiers in Microbiology. 15():-. [doi:10.3389/fmicb.2024.1412775]38989032
2024Sykes, E.M.E., Mateo-Estrada, V., Engelberg, R., Muzaleva, A., Zhanel, G., Dettman, J., Chapados, J., Gerdis, S., Akineden, Ö., Khan, I.U.H., Castillo-Ramírez, S., Kumar, A.. (2024). "Phylogenomic and phenotypic analyses highlight the diversity of antibiotic resistance and virulence in both human and non-human Acinetobacter baumannii .". mSphere. 9(3):-. [doi:10.1128/msphere.00741-23]38440986
2024Aguilar-Vera, A., Bello-López, E., Pantoja-Nuñez, G.I., Rodríguez-López, G.M., Morales-Erasto, V., Castillo-Ramírez, S.. (2024). "Acinetobacter junii : an emerging One Health pathogen.". mSphere. 9(5):-. [doi:10.1128/msphere.00162-24]38606973
2023Moreno-Manjón, J., Castillo-Ramírez, S., Jolley, K.A., Maiden, M.C.J., Gayosso-Vázquez, C., Fernández-Vázquez, J.L., Mateo-Estrada, V., Giono-Cerezo, S., Alcántar-Curiel, M.D.. (2023). "Acinetobacter baumannii IC2 and IC5 Isolates with Co-Existing bla OXA-143-like and bla OXA-72 and Exhibiting Strong Biofilm Formation in a Mexican Hospital.". Microorganisms. 11(9):-. [doi:10.3390/microorganisms11092316]37764160
2023Castillo-Ramírez S. (2023). "Genomic epidemiology of Acinetobacter baumannii goes global.". Mbio. 14(6):-. [doi:10.1128/mbio.02520-23]37909743
2023Griselda López-Romo, Isela Santamaria, Rosa, Bustos, Patricia, Francisco Echavarría, Luis Roberto Reveles-Torres, Gonzalez, Vctor. (2023). "The elite common bean Phaseolus vulgaris cultivar Pinto Saltillo hosts a rich and diverse array of plant-growth promoting bacteria in its rhizosphere". bioRxiv. ():-. [doi:https://doi.org/10.1101/2023.10.23.563606]
2023Nemec, A., Španelová, P., Shestivska, V., Radolfová-Krížová, L., Maixnerová, M., Feng, Y., Qin, J., Cevallos, M.A., Zong, Z.. (2023). "Proposal for Acinetobacter higginsii sp. nov. to accommodate organisms of human clinical origin previously classified as Acinetobacter genomic species 16.". International Journal Of Systematic And Evolutionary Microbiology. 73(10):-. [doi:10.1099/ijsem.0.006114]37889259
2023Castillo-Ramírez, S.. (2023). "The importance of Acinetobacter baumannii from non-human sources.". LANCET MICROBE. 4(10):761-762. [doi:10.1016/S2666-5247(23)00246-X]37625430
2023Mateo-Estrada, V., Tyrrell, C., Evans, B.A., Aguiiar-Vera, A., Drissner, D., Castillo-Ramirez, S., Walsh, F.. (2023). "Acinetobacter baumannii from grass: novel but non-resistant clones.". Microbial genomics. 9(7):-. [doi:10.1099/mgen.0.001054]37439781
2023Mendoza-Hoffmann, Francisco, Yang, Lingyun, Buratto, Damiano, Brito-Sanchez, Jorge, Garduno-Javier, Gilberto, Salinas-Lopez, Emiliano, Uribe-Alvarez, Cristina, Ortega, Raquel, Sotelo-Serrano, Oliver, Cevallos, Miguel Angel, Ramirez-Silva, Leticia, Uribe-Carvajal, Salvador, Perez-Hernandez, Gerardo, Celis-Sandoval, Heliodoro, Garcia-Trejo, Jose J.. (2023). "Inhibitory to non-inhibitory evolution of the ? subunit of the F1FO-ATPase of Paracoccus denitrificans and a-proteobacteria as related to mitochondrial endosymbiosis". Frontiers in molecular biosciences. 10():-. [doi:10.3389/fmolb.2023.1184200]37664184
2023Sykes EME, Mateo-Estrada V, Zhanel G, Dettman J, Chapados J, Gerdis S, Akineden Ö, Khan IIU, Castillo-Ramírez S, Kumar A. (2023). "Emergence of ADC-5 Cephalosporinase in environmental Acinetobacter baumannii from a German tank milk with a novel Sequence Type.". Access Microbiology. 5(6):-. [doi:10.1099/acmi.0.000485.v3]37424542
2023Espinosa-Mazariego, K., Saldaña-Ahuactzi, Z., Ochoa, S.A., González-Pedrajo, B., Cevallos, M.A., Rodríguez-Martínez, R., Romo-Castillo, M., Hernández-Castro, R., Cruz-Córdova, A., Xicohtencatl-Cortes, J.. (2023). "Recombinant Escherichia coli BL21 with LngA Variants from ETEC E9034A Promotes Adherence to HT-29 Cells.". PATHOGENS. 12(2):-. [doi:10.3390/pathogens12020337]36839609
2023Nodari, C.S., Opazo-Capurro, A., Castillo-Ramirez, S., Mattioni Marchetti, V.. (2023). "Editorial: Mobile genetic elements as dissemination drivers of multidrug-resistant Gram-negative bacteria.". FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 13():-. [doi:10.3389/fcimb.2023.1180510]37009500
2023Fernández-Vázquez, J.L., Hernández-González, I.L., Castillo-Ramírez, S., Jarillo-Quijada, M.D., Gayosso-Vázquez, C., Mateo-Estrada, V.E., Morfín-Otero, R., Rodríguez-Noriega, E., Santos-Preciado, J.I., Alcántar-Curiel, M.D.. (2023). "Pandrug-resistant Acinetobacter baumannii from different clones and regions in Mexico have a similar plasmid carrying the bla OXA-72 gene.". FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 13():-. [doi:10.3389/fcimb.2023.1278819]38192399
2023Karah, N., Mateo-Estrada, V., Castillo-Ramírez, S., Higgins, P.G., Havenga, B., Khan, W., Domingues, S., Da Silva, G.J., Poirel, L., Nordmann, P., Ambrosi, C., Ma, C., McClean, S., Quiroga, M.P., Alvarez, V.E., Centron, D., Zarrilli, R., Kenyon, J.J., Russo, T.A., Evans, B.A., Opazo-Capurro, A., Rafei, R., Hamze, M., Daoud, Z., Ahmad, I., Rather, P.N., Hall, R.M., Wilharm, G., Uhlin, B.E.. (2023). "The Acinetobacter baumannii website (Ab-web): a multidisciplinary knowledge hub, communication platform, and workspace.". Fems Microbes. 4():-. [doi:10.1093/femsmc/xtad009]37333444
2023Gómez-Martínez, J., Rocha-Gracia, R.d.C., Bello-López, E., Cevallos, M.A., Castañeda-Lucio, M., Sáenz, Y., Jiménez-Flores, G., Cortés-Cortés, G., López-García, A., Lozano-Zarain, P.. (2023). "Comparative Genomics of pseudomonas Aeruginosa Strains Isolated from Different Ecological Niches.". ANTIBIOTICS-BASEL. 12(5):-. [doi:10.3390/antibiotics12050866]37237769
2023Mendez-Cruz, Carlos-Francisco, Joel Rodríguez-Herrera, Alfredo Varela-Vega, Valeria Mateo-Estrada, Castillo Ramírez, Santiago. (2023). "Unsupervised Learning and Natural Language Processing Point Out Bias in Research Trends of a Superbug". Social Science Research Network. ():-. [doi:10.2139/ssrn.4503262]
2022Castro-Jaimes, S., Guerrero, G., Bello-López, E., Cevallos, M.A.. (2022). "Replication initiator proteins of Acinetobacter baumannii plasmids: An update note.". Plasmid. 119-120():-. [doi:10.1016/j.plasmid.2021.102616]34953823
2022Castillo-Ramírez, S.. (2022). "Zoonotic Acinetobacter baumannii: the need for genomic epidemiology in a One Health context.". LANCET MICROBE. 3(12):895-896. [doi:10.1016/S2666-5247(22)00255-5]36150399
2022Cevallos MA, Basanta MD, Bello-López E, Escobedo-Muñoz AS, González-Serrano FM, Nemec A, Romero-Contreras YJ, Serrano M, Rebollar EA. (2022). "Genomic characterization of antifungal Acinetobacter bacteria isolated from the skin of the frogs Agalychnis callidryas and Craugastor fitzingeri.". Fems Microbiology Ecology. 98(12):-. [doi:10.1093/femsec/fiac126]36288213
2022Van Cauwenberghe, J., Santamaría, R.I., Bustos, P., González, V.. (2022). "Novel lineages of single-stranded DNA phages that coevolved with the symbiotic bacteria Rhizobium .". Frontiers in Microbiology. 13():-. [doi:10.3389/fmicb.2022.990394]36177468
2022Gómez-Martínez, J., Rocha-Gracia, R.d.C., Bello-López, E., Cevallos, M.A., Castañeda-Lucio, M., López-García, A., Sáenz, Y., Jiménez-Flores, G., Cortés-Cortés, G., Lozano-Zarain, P.. (2022). "A Plasmid Carrying bla IMP-56 in pseudomonas Aeruginosa Belonging to a Novel Resistance Plasmid Family.". Microorganisms. 10(9):-. [doi:10.3390/microorganisms10091863]36144465
2022Lopez-Leal, Gamaliel, Carolina Camelo-Valera, Laura, Manuel Hurtado-Ramirez, Juan, Verleyen, Jerome, Castillo-Ramirez, Santiago, Reyes-Munoz, Alejandro. (2022). "Mining of Thousands of Prokaryotic Genomes Reveals High Abundance of Prophages with a Strictly Narrow Host Range.". mSystems. 7(4):-. [doi:10.1128/msystems.00326-22]35880895
2022Mateo-Estrada, Valeria, Vali, Leila, Hamouda, Ahmed, Evans, Benjamin A., Castillo-Ramirez, Santiago. (2022). "Acinetobacter baumannii Sampled from Cattle and Pigs Represent Novel Clones.". Microbiology spectrum. 10(4):-. [doi:10.1128/spectrum.01289-22]35766493
2022Lopez, E.S., Elufisan, T.O., Bustos, P., Charles, C.P.M., Mendoza-Herrera, A., Guo, X.. (2022). "Complete Genome Report of a Hydrocarbon-Degrading Sphingobium yanoikuyae S72". APPLIED SCIENCES-BASEL. 12(12):-. [doi:10.3390/app12126201]
2022Castillo-Ramirez, Santiago. (2022). "Beyond microbial core genomic epidemiology: towards pan genomic epidemiology". LANCET MICROBE. 3(4):244-245. [doi:10.1016/S2666-5247(22)00058-1]35544058
2022Cevallos, M.A., Degli Esposti, M.. (2022). "New Alphaproteobacteria Thrive in the Depths of the Ocean with Oxygen Gradient.". Microorganisms. 10(2):-. [doi:10.3390/microorganisms10020455]35208909
2022Santamaría, R.I., Bustos, P., Van Cauwenberghe, J., González, V.. (2022). "Hidden diversity of double-stranded DNA phages in symbiotic Rhizobium species.". PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. 377(1842):-. [doi:10.1098/rstb.2020.0468]34839703
2022Hernández-González, I.L., Mateo-Estrada, V., Castillo-Ramirez, S.. (2022). "The promiscuous and highly mobile resistome of Acinetobacter baumannii .". Microbial genomics. 8(1):-. [doi:10.1099/mgen.0.000762]35075990
2021de Luna-Valdez, L., Chenge-Espinosa, M., Hernández-Muñoz, A., Cordoba, E., López-Leal, G., Castillo-Ramírez, S., León, P.. (2021). "Reassessing the evolution of the 1-deoxy-D-xylulose 5-phosphate synthase family suggests a possible novel function for the DXS class 3 proteins.". Plant Science. 310():-. [doi:10.1016/j.plantsci.2021.110960]34315585
2021Norte, A.C., Boyer, P.H., Castillo-Ramirez, S., Chvostác, M., Brahami, M.O., Rollins, R.E., Woudenberg, T., Didyk, Y.M., Derdakova, M., Núncio, M.S., de Carvalho, I.L., Margos, G., Fingerle, V.. (2021). "The Population Structure of Borrelia lusitaniae Is Reflected by a Population Division of Its Ixodes Vector.". Microorganisms. 9(5):-. [doi:10.3390/microorganisms9050933]33925391
2021Mateo-Estrada, V., Fernández-Vázquez, J.L., Moreno-Manjón, J., Hernández-González, I.L., Rodríguez-Noriega, E., Morfín-Otero, R., Alcántar-Curiel, M.D., Castillo-Ramírez, S.. (2021). "Accessory Genomic Epidemiology of Cocirculating Acinetobacter baumannii Clones.". mSystems. 6(4):-. [doi:10.1128/mSystems.00626-21]34282943
2021Escobedo-Muñoz, A.S., Bello-López, E., Velázquez-Acosta, C., Cornejo-Juárez, P., Volkow-Fernández, P., Cevallos, M.Á.. (2021). "Complete Genome Sequence of Acinetobacter junii Strain INC8271, Isolated from a Patient with Metastatic Cancer and Bacteremia.". Microbiology Resource Announcements. 10(33):-. [doi:10.1128/MRA.00604-21]34410161
2021Van Cauwenberghe, J., Santamaría, R.I., Bustos, P., Juárez, S., Ducci, M.A., Figueroa Fleming, T., Etcheverry, A.V., González, V.. (2021). "Spatial patterns in phage-Rhizobium coevolutionary interactions across regions of common bean domestication.". ISME JOURNAL. 15(7):2092-2106. [doi:10.1038/s41396-021-00907-z]33558688
2021Ford, S., Moeskjær, S., Young, P., Santamaría, R.I., Harrison, E.. (2021). "Introducing a Novel, Broad Host Range Temperate Phage Family Infecting Rhizobium leguminosarum and Beyond.". Frontiers in Microbiology. 12():-. [doi:10.3389/fmicb.2021.765271]34858375
2021Castillo-Ramírez, S., Ghaly, T., Gillings, M.. (2021). "Non-clinical settings - the understudied facet of antimicrobial drug resistance.". Environmental Microbiology. 23(12):7271-7274. [doi:10.1111/1462-2920.15841]34773441
2021Evans, B.A., Kumar, A., Castillo-Ramírez, S.. (2021). "Editorial: Genomic Basis of Antibiotic Resistance and Virulence in Acinetobacter .". Frontiers in Microbiology. 12():-. [doi:10.3389/fmicb.2021.670975]33859632
2021López-Leal, G., Reyes-Muñoz, A., Santamaria, R.I., Cevallos, M.A., Pérez-Monter, C., Castillo-Ramírez, S.. (2021). "A novel vieuvirus from multidrug-resistant Acinetobacter baumannii.". ARCHIVES OF VIROLOGY. 166(5):1401-1408. [doi:10.1007/s00705-021-05010-4]33635432
2020Arredondo-Hernández, R., Schmulson, M., Orduña, P., López-Leal, G., Zarate, A.M., Alanis-Funes, G., Alcaraz, L.D., Santiago-Cruz, R., Cevallos, M.A., Villa, A.R., Ponce-de-León Rosales, S., López-Vidal, Y.. (2020). "Mucosal Microbiome Profiles Polygenic Irritable Bowel Syndrome in Mestizo Individuals.". FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 10():-. [doi:10.3389/fcimb.2020.00072]32266159
2020Castro-Jaimes, S., Bello-López, E., Velázquez-Acosta, C., Volkow-Fernández, P., Lozano-Zarain, P., Castillo-Ramírez, S., Cevallos, M.A.. (2020). "Chromosome Architecture and Gene Content of the Emergent Pathogen Acinetobacter haemolyticus .". Frontiers in Microbiology. 11():-. [doi:10.3389/fmicb.2020.00926]32670207
2020Singh, Manu, De Silva, P. Malaka, Al-Saadi, Yasser, Switala, Jacek, Loewen, Peter C., Hausner, Georg, Chen, Wangxue, Hernandez, Ismael, Castillo-Ramirez, Santiago, Kumar, Ayush. (2020). "Characterization of extremely drug-resistant and hypervirulent Acinetobacter baumannii ab030". ANTIBIOTICS-BASEL. 9(6):1-16. [doi:10.3390/antibiotics9060328]32560407
2020Salgado-Camargo, A.D., Castro-Jaimes, S., Gutierrez-Rios, R.M., Lozano, L.F., Altamirano-Pacheco, L., Silva-Sanchez, J., Pérez-Oseguera, Á., Volkow, P., Castillo-Ramírez, S., Cevallos, M.A.. (2020). "Structure and Evolution of Acinetobacter baumannii Plasmids". Frontiers in Microbiology. 11():-. [doi:10.3389/fmicb.2020.01283]32625185
2020Castillo-Ramírez, S., Mateo-Estrada, V., Gonzalez-Rocha, G., Opazo-Capurro, A.. (2020). "Phylogeographical Analyses and Antibiotic Resistance Genes of Acinetobacter johnsonii Highlight Its Clinical Relevance". mSphere. 5(4):-. [doi:10.1128/mSphere.00581-20]32611704
2020Cornejo-Juárez, P., Cevallos, M.A., Castro-Jaimes, S., Castillo-Ramìrez, S., Velázquez-Acosta, C., Martìnez-Oliva, D., Pérez-Oseguera, A., Rivera-Buendìa, F., Volkow-Fernández, P.. (2020). "High mortality in an outbreak of multidrug resistant Acinetobacter baumannii infection introduced to an oncological hospital by a patient transferred from a general hospital.". Plos One. 15(7):-. [doi:10.1371/journal.pone.0234684]32702006
2020Cevallos, M.A., Guerrero, G., Ríos, S., Arroyo, A., Villalobos, M.A., Porta, H.. (2020). "The mitogenome of Pseudocrossidium replicatum, a desiccation-tolerant moss". MITOCHONDRIAL DNA PART B-RESOURCES. 5(3):2339-2341. [doi:10.1080/23802359.2020.1774436]33457783
2020Barrios-Villa, E., Martínez de la Peña, C.F., Lozano-Zaraín, P., Cevallos, M.A., Torres, C., Torres, A.G., Rocha-Gracia, R.d.C.. (2020). "Comparative genomics of a subset of Adherent/Invasive Escherichia coli strains isolated from individuals without inflammatory bowel disease.". Genomics. 112(2):1813-1820. [doi:10.1016/j.ygeno.2019.10.013]31689478
2020Rivera-Mendoza, Daniel, Martinez-Flores, Irma, Santamaria, Rosa I., Lozano, Luis, Bustamante, Victor H., Perez-Morales, Deyanira. (2020). "Genomic Analysis Reveals the Genetic Determinants Associated With Antibiotic Resistance in the Zoonotic Pathogen Campylobacter spp. Distributed Globally". Frontiers in Microbiology. 11():-. [doi:10.3389/fmicb.2020.513070]33042043
2020López-Leal, G., Santamaria, R.I., Cevallos, M.Á., Gonzalez, V., Castillo-Ramírez, S.. (2020). "Letter to the Editor: Prophages Encode Antibiotic Resistance Genes in Acinetobacter baumannii .". MICROBIAL DRUG RESISTANCE. 26(10):1275-1277. [doi:10.1089/mdr.2019.0362]32109174
2020Mancilla-Rojano, J., Ochoa, S.A., Reyes-Grajeda, J.P., Flores, V., Medina-Contreras, O., Espinosa-Mazariego, K., Parra-Ortega, I., Rosa-Zamboni, D.D.L., Castellanos-Cruz, M.d.C., Arellano-Galindo, J., Cevallos, M.A., Hernández-Castro, R., Xicohtencatl-Cortes, J., Cruz-Córdova, A.. (2020). "Molecular Epidemiology of Acinetobacter calcoaceticus - Acinetobacter baumannii Complex Isolated From Children at the Hospital Infantil de México Federico Gómez.". Frontiers in Microbiology. 11():-. [doi:10.3389/fmicb.2020.576673]33178158
2020Hernández-González, I.L., Castillo-Ramírez, S.. (2020). "Antibiotic-resistant Acinetobacter baumannii is a One Health problem". LANCET MICROBE. 1(7):279-279. [doi:10.1016/S2666-5247(20)30167-1]35544213
2020Bello-López, E., Rocha-Gracia, R.d.C., Castro-Jaimes, S., Cevallos, M.Á., Vargas-Cruz, M., Verdugo-Yocupicio, R., Sáenz, Y., Torres, C., Gutiérrez-Cázarez, Z., Arenas-Hernández, M.M.d.l.P., Lozano-Zarain, P.. (2020). "Antibiotic resistance mechanisms in Acinetobacter spp. strains isolated from patients in a paediatric hospital in Mexico.". JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE. 23():120-129. [doi:10.1016/j.jgar.2020.08.014]32916332
2020Balderas-Ruíz, K.A., Bustos, P., Santamaria, R.I., González, V., Cristiano-Fajardo, S.A., Barrera-Ortíz, S., Mezo-Villalobos, M., Aranda-Ocampo, S., Guevara-García, Á.A., Galindo, E., Serrano-Carreón, L.. (2020). "Bacillus velezensis 83 a bacterial strain from mango phyllosphere, useful for biological control and plant growth promotion". AMB Express. 10(1):-. [doi:10.1186/s13568-020-01101-8]32894363
2020Margos, G., Castillo-Ramirez, S., Cutler, S., Dessau, R.B., Eikeland, R., Estrada-Peña, A., Gofton, A., Graña-Miraglia, L., Hunfeld, K.P., Krause, A., Lienhard, R., Lindgren, P.E., Oskam, C., Rudolf, I., Schwartz, I., Sing, A., Stevenson, B., Wormser, G.P., Fingerle, V.. (2020). "Rejection of the name Borreliella and all proposed species comb. nov. placed therein". International Journal Of Systematic And Evolutionary Microbiology. 70(5):3577-3581. [doi:10.1099/ijsem.0.004149]32320380
2020Graña-Miraglia, L., Sikutova, S., Vancová, M., Bílý, T., Fingerle, V., Sing, A., Castillo-Ramírez, S., Margos, G., Rudolf, I.. (2020). "Spirochetes isolated from arthropods constitute a novel genus Entomospira genus novum within the order Spirochaetales". SCIENTIFIC REPORTS. 10(1):-. [doi:10.1038/s41598-020-74033-9]33051478
2020Mayoral-Terán, C., Flores-Moreno, K., Cevallos, M.A., Volkow-Fernández, P., Castillo-Ramírez, S., Graña-Miraglia, L., López-Vidal, Y.. (2020). "High Phenotypic and Genotypic Diversity of Enterococcus faecium from Clinical and Commensal Isolates in Third Level Hospital.". MICROBIAL DRUG RESISTANCE. 26(3):227-237. [doi:10.1089/mdr.2019.0039]31545121
2020De la Rosa, C., Lozano, L., Castillo-Ramírez, S., Covarrubias, A.A., Reyes, J.L.. (2020). "Origin and Evolutionary Dynamics of the miR2119 and ADH1 Regulatory Module in Legumes.". Genome Biology And Evolution. 12(12):2355-2369. [doi:10.1093/gbe/evaa205]33045056
2020Graña-Miraglia, L., Evans, B.A., López-Jácome, L.E., Hernández-Durán, M., Colín-Castro, C.A., Volkow-Fernández, P., Cevallos, M.A., Franco-Cendejas, R., Castillo-Ramírez, S.. (2020). "Origin of OXA-23 variant OXA-239 from a recently emerged lineage of Acinetobacter baumannii international clone V". mSphere. 5(1):-. [doi:10.1128/mSphere.0801-19]31915222
2019Lopez-Leal, Gamaliel, Cesar Zuniga-Moya, Julio, Castro-Jaimes, Semiramis, Grana-Miraglia, Lucia, Perez-Oseguera, Angeles, Sarahi Reyes-Garcia, Hilda, David Gough-Coto, Simmons, Pavon-Madrid, Rene, Aurora Bejarano, Suyapa, Ferrera, Annabelle, Castillo-Ramirez, Santiago, Cevallos, Miguel A.. (2019). "Unexplored Genetic Diversity of Multidrug- and Extremely Drug-Resistant Acinetobacter baumannii Isolates from Tertiary Hospitals in Honduras". MICROBIAL DRUG RESISTANCE. 25(5):690-695. [doi:10.1089/mdr.2018.0311]30614762
2019Cabrera-Contreras R, Santamaría RI, Bustos P, Martínez-Flores I, Meléndez-Herrada E, Morelos-Ramírez R, Barbosa-Amezcua M, González-Covarrubias V, Silva-Herzog E, Soberón X, González V. (2019). "Genomic diversity of prevalent Staphylococcus epidermidis multidrug-resistant strains isolated from a Children's Hospital in México City in an eight-years survey.". Peerj. 7(11):-. [doi:10.7717/peerj.8068]31768302
2019Cevallos, Miguel A., Guerrero, Gabriela, Rios, Selma, Arroyo, Analilia, Angel Villalobos, Miguel, Porta, Helena. (2019). "The chloroplast genome of the desiccation-tolerant moss Pseudocrossidium replicatum (Taylor) R.H. Zander.". GENETICS AND MOLECULAR BIOLOGY. 42(2):488-493. [doi:10.1590/1678-4685-GMB-2018-0184]31323081
2019Gonzalez, Victor, Isela Santamaria, Rosa, Bustos, Patricia, Maria Perez-Carrascal, Olga, Vinuesa, Pablo, Juarez, Soledad, Martinez-Flores, Irma, Angel Cevallos, Miguel, Brom, Susana, Martinez-Romero, Esperanza, Romero, David. (2019). "Phylogenomic Rhizobium Species Are Structured by a Continuum of Diversity and Genomic Clusters". Frontiers in Microbiology. 10():-. [doi:10.3389/fmicb.2019.00910]31114559
2019Mancilla-Rojano, J., Castro-Jaimes, S., Ochoa, S.A., Del Valle, M.B., Luna-Pineda, V.M., Bustos, P., Laris-González, A., Arellano-Galindo, J., Parra-Ortega, I., Hernández-Castro, R., Cevallos, M.A., Xicohtencatl-Cortes, J., Cruz-Córdova, A.. (2019). "Whole-Genome Sequences of Five Acinetobacter baumannii Strains From a Child With Leukemia M2.". Frontiers in Microbiology. 10():-. [doi:10.3389/fmicb.2019.00132]30787915
2019Bello-Lopez, Elena, Castro-Jaimes, Semiramis, Angel Cevallos, Miguel, del Carmen Rocha-Gracia, Rosa, Castaneda-Lucio, Miguel, Saenz, Yolanda, Torres, Carmen, Gutierrez-Cazares, Zita, Martinez-Laguna, Ygnacio, Lozano-Zarain, Patricia. (2019). "Resistome and a Novel bla(NDM-1)-Harboring Plasmid of an Acinetobacter haemolyticus Strain from a Children's Hospital in Puebla, Mexico". MICROBIAL DRUG RESISTANCE. 25(7):1023-1031. [doi:10.1089/mdr.2019.0034]31335270
2019Elufisan, T.O., Lozano, L., Bustos, P., Rodríguez-Luna, I.C., Sánchez-Varela, A., Oyedara, O.O., Villalobos-López, M.Á., Guo, X.. (2019). "Complete Genome Sequence of Stenotrophomonas maltophilia Strain SVIA2, Isolated from Crude Oil-Contaminated Soil in Tabasco, Mexico.". Microbiology Resource Announcements. 8(30):-. [doi:10.1128/MRA.00529-19]31346014
2019Carreón-Rodríguez, O.E., Gutiérrez-Ríos, R.M., Acosta, J.L., Martinez, A., Cevallos, M.A.. (2019). "Phenotypic and genomic analysis of Zymomonas mobilis ZM4 mutants with enhanced ethanol tolerance.". Biotechnology Reports. 23():-. [doi:10.1016/j.btre.2019.e00328]30984572
2019Mateo-Estrada, Valeria, Grana-Miraglia, Lucia, Lopez-Leal, Gamaliel, Castillo-Ramirez, Santiago. (2019). "Phylogenomics Reveals Clear Cases of Misclassification and Genus-Wide Phylogenetic Markers for Acinetobacter.". Genome Biology And Evolution. 11(9):2531-2541. [doi:10.1093/gbe/evz178]31406982
2018Challagundla, Lavanya, Reyes, Jinnethe, Rafiqullah, Iftekhar, Sordelli, Daniel O., Echaniz-Aviles, Gabriela, Velazquez-Meza, Maria E., Castillo-Ramirez, Santiago, Fittipaldi, Nahuel, Feldgarden, Michael, Chapman, Sinead B., Calderwood, Michael S., Carvajal, Lina P., Rincon, Sandra, Hanson, Blake, Planet, Paul J., Arias, Cesar A., Diaz, Lorena, Robinson, D. Ashley. (2018). "Phylogenomic classification and the evolution of Clonal complex 5 methicillin-resistant Staphylococcus aureus in the Western Hemisphere". Frontiers in Microbiology. 9():-. [doi:10.3389/fmicb.2018.01901]30186248
2018Frisch MB, Castillo-Ramirez S, Petit RA 3rd, Farley MM, Ray SM, Albrecht VS, Limbago BM, Hernandez J, See I, Satola SW, Read TD. (2018). "Invasive methicillin-resistant Staphylococcus aureus USA500 strains from the U.S. Emerging Infections Program constitute three geographically distinct lineages". mSphere. 3(3):-. [doi:10.1128/mSphere.00571-17]29720528
2018Stefan, A., Van Cauwenberghe, J., Rosu, C.M., Stedel, C., Labrou, N.E., Flemetakis, E., Efrose, R.C.. (2018). "Genetic diversity and structure of Rhizobium leguminosarum populations associated with clover plants are influenced by local environmental variables". Systematic And Applied Microbiology. 41(3):251-259. [doi:10.1016/j.syapm.2018.01.007]29452714
2018Salgado, H., Martínez-Flores, I., Bustamante, V.H., Alquicira-Hernández, K., García-Sotelo, J.S., García-Alonso, D., Collado-Vides, J.. (2018). "Using RegulonDB, the Escherichia coli K-12 Gene Regulatory Transcriptional Network Database.". Current Protocols in Bioinformatics. 61(1):1321-13230. [doi:10.1002/cpbi.43]30040192
2018Mendoza-Hoffmann, F., Pérez-Oseguera, Á., Cevallos, M.Á., Zarco-Zavala, M., Ortega, R., Peña-Segura, C., Espinoza-Simón, E., Uribe-Carvajal, S., García-Trejo, J.J.. (2018). "The Biological Role of the zeta Subunit as Unidirectional Inhibitor of the F1FO-ATPase of Paracoccus denitrificans". CELL REPORTS. 22(4):1067-1078. [doi:10.1016/j.celrep.2017.12.106]29386127
2018Julieta Solis-Gonzalez, Claudia, Dominguez-Malfavon, Lilianha, Vargas-Suarez, Martin, Gaytan, Itzel, Angel Cevallos, Miguel, Lozano, Luis, Javier Cruz-Gomez, M., Loza-Tavera, Herminia. (2018). "Novel metabolic pathway for N-methylpyrrolidone degradation in Alicycliphilus sp. strain BQ1". Applied And Environmental Microbiology. 84(1):-. [doi:10.1128/AEM.02136-17]29030443
2018Graña-Miraglia, L., Arreguín-Pérez, C., López-Leal, G., Muñoz, A., Pérez-Oseguera, A., Miranda-Miranda, E., Cossío-Bayúgar, R., Castillo-Ramírez, S.. (2018). "Phylogenomics picks out the par excellence markers for species phylogeny in the genus Staphylococcus". Peerj. 2018(10):-. [doi:10.7717/peerj.5839]30386709
2017Alatorre-Fernandez, Pamela, Mayoral-Teran, Claudia, Velazquez-Acosta, Consuelo, Franco-Rodriguez, Cecilia, Flores-Moreno, Karen, Angel Cevallos, Miguel, Lopez-Vidal, Yolanda, Volkow-Fernandez, Patricia. (2017). "A polyclonal outbreak of bloodstream infections by Enterococcus faecium in patients with hematologic malignancies". American Journal of Infection Control. 45(3):260-266. [doi:10.1016/j.ajic.2016.10.002]27852447
2017Osorio A, Camarena L, Cevallos MA, Poggio S. (2017). "A New Essential Cell Division Protein in Caulobacter Crescentus". Journal Of Bacteriology. 199(8):-. [doi:10.1128/JB.00811-16]28167520
2017Olvera, C., Santamaría, R.I., Bustos, P., Vallejo, C., Montor, J.J., Wacher, C., Munguia, A.L.. (2017). "Draft genome sequence of Leuconostoc citreum CW28 isolated from pozol, a pre-Hispanic fermented corn beverage". Microbiology Resource Announcements. 5(48):-. [doi:10.1128/genomeA.01283-17]29192074
2017Graña-Miraglia L, Lozano LF, Velázquez C, Volkow-Fernández P, Pérez-Oseguera Á, Cevallos MA, Castillo-Ramírez S. (2017). "Rapid gene turnover as a significant source of genetic variation in a recently seeded population of a healthcare-associated pathogen". Frontiers in Microbiology. 8(SEP):1817-1817. [doi:10.3389/fmicb.2017.01817]28979253
2017Pérez-Oseguera Á, Castro-Jaimes S, Salgado-Camargo AD, Silva-Sanchez J, Garza-González E, Castillo-Ramírez S, Cevallos MÁ. (2017). "Complete genome sequence of a blaOXA-58-producing Acinetobacter baumannii strain isolated from a Mexican hospital". Microbiology Resource Announcements. 5(36):-. [doi:10.1128/genomeA.00949-17]28883144
2017Perez-Morales, Deyanira, Banda, Maria M., Elizabeth Chau, N. Y., Salgado, Heladia, Martinez-Flores, Irma, Antonio Ibarra, J., Ilyas, Bushra, Coombes, Brian K., Bustamante, Victor H.. (2017). "The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella". PLOS PATHOGENS. 13(7):-. [doi:10.1371/journal.ppat.1006497]28704543
2017Sigala, J.C., Suárez, B.P., Lara, A.R., Borgne, S.L., Bustos, P., Santamaría, R.I., González, V., Martinez, A.. (2017). "Genomic and physiological characterization of a laboratory-isolated Acinetobacter Schindleri ACE strain that quickly and efficiently catabolizes acetate". MICROBIOLOGY-SGM. 163(7):1052-1064. [doi:10.1099/mic.0.000488]28671531
2017Santamaría, R.I., Bustos, P., Pérez-Carrascal, O.M., Miranda-Sánchez, F., Vinuesa, P., Martínez-Flores, I., Juárez, S., Lozano, L., Martínez-Romero, E., Cevallos, M.Á., Romero, D., Dávila, G., Ormeño-Orrillo, E., González, V.. (2017). "Complete Genome Sequences of Eight Rhizobium Symbionts Associated with Common Bean ( Phaseolus vulgaris ).". Genome Announcements. 5(30):-. [doi:10.1128/genomeA.00645-17]28751391
2017Bustos, P., Santamaría, R.I., Pérez-Carrascal, O.M., Acosta, J.L., Lozano, L., Juárez, S., Martínez-Flores, I., Martínez-Romero, E., Cevallos, M.Á., Romero, D., Dávila, G., Vinuesa, P., Miranda, F., Ormeño, E., González, V.. (2017). "Complete Genome Sequences of Three Rhizobium gallicum Symbionts Associated with Common Bean ( Phaseolus vulgaris ).". Genome Announcements. 5(11):-. [doi:10.1128/genomeA.00030-17]28302777
2017Saldaña-Ahuactzi Z., Cruz-Córdova A., Rodea G.E., Porta H., Navarro-Ocaña A., Eslava-Campos C., Cevallos M.A., Xicohtencatl-Cortes J.. (2017). "Genome sequence of enterotoxigenic Escherichia coli strain FMU073332". Microbiology Resource Announcements. 5(8):-. [doi:10.1128/genomeA.01600-16]28232434
2017Angel Vences-Guzman, Miguel, Goetting-Minesky, M. Paula, Guan, Ziqiang, Castillo-Ramirez, Santiago, America Cordoba-Castro, Luz, Lopez-Lara, Isabel M., Geiger, Otto, Sohlenkamp, Christian, Fenno, J. Christopher. (2017). "1,2-Diacylglycerol choline phosphotransferase catalyzes the final step in the unique Treponema denticola phosphatidylcholine biosynthesis pathway". Molecular Microbiology. 103(5):896-912. [doi:10.1111/mmi.13596]28009086
2017Romero-Gutierrez, Teresa, Peguero-Sanchez, Esteban, Cevallos, Miguel A., Batista, Cesar V. F., Ortiz, Ernesto, Possani, Lourival D.. (2017). "A Deeper Examination of Thorellius Atrox Scorpion Venom Components with Omic Techonologies". Toxins. 9(12):-. [doi:10.3390/toxins9120399]29231872
2016López-Leal G, Cevallos MA, Castillo-Ramírez S. (2016). "Evolution of a sigma factor: An All-In-One of Gene Duplication, Horizontal Gene Transfer, Purifying Selection, and Promoter Differentiation". Frontiers in Microbiology. 7(APR):581-581. [doi:10.3389/fmicb.2016.00581]27199915
2016Becker, Noemie S., Margos, Gabriele, Blum, Helmut, Krebs, Stefan, Graf, Alexander, Lane, Robert S., Castillo-Ramirez, Santiago, Sing, Andreas, Fingerle, Volker. (2016). "Recurrent evolution of host and vector association in bacteria of the Borrelia burgdorferi sensu lato species complex". Bmc Genomics. 17(1):734-734. [doi:10.1186/s12864-016-3016-4]27632983
2016Aanensen, David M., Feil, Edward J., Holden, Matthew T. G., Dordel, Janina, Yeats, Corin A., Fedosejev, Artemij, Goater, Richard, Castillo-Ramirez, Santiago, Corander, Jukka, Colijn, Caroline, Chlebowicz, Monika A., Schouls, Leo, Heck, Max, Pluister, Gerlinde, Ruimy, Raymond, Kahlmeter, Gunnar, Ahman, Jenny, Matuschek, Erika, Friedrich, Alexander W., Parkhill, Julian, Bentley, Stephen D., Spratt, Brian G., Grundmann, Hajo, ESCMID Study Grp Mol Epidemiologic, European Staphylococcal Ref Lab Wo. (2016). "Whole-genome sequencing for routine pathogen surveillance in public health: A population snapshot of invasive Staphylococcus aureus in Europe". Mbio. 7(3):-. [doi:10.1128/mBio.00444-16]27150362
2016Garza-Ramos U, Silva-Sánchez J, Catalán-Nájera J, Barrios H, Rodríguez-Medina N, Garza-González E, Cevallos MA, Lozano L. (2016). "Draft genome sequence of a hypermucoviscous extended-spectrum-ß-lactamase-producing Klebsiella quasipneumoniae subsp. similipneumoniae clinical isolate". Microbiology Resource Announcements. 4(4):-. [doi:10.1128/genomeA.00475-16]27389261
2016Martínez-Flores I, Pérez-Morales D, Sánchez-Pérez M, Paredes CC, Collado-Vides J, Salgado H, Bustamante VH. (2016). "In Silico clustering of Salmonella global gene expression data reveals novel genes co-regulated with the SPI-1 virulence genes through HilD". SCIENTIFIC REPORTS. 6():37858-37858. [doi:10.1038/srep37858]27886269
2016Joseph, Sandeep J., Cox, Daniel, Wolff, Bernard, Morrison, Shatavia S., Kozak-Muiznieks, Natalia A., Frace, Michael, Didelot, Xavier, Castillo-Ramirez, Santiago, Winchell, Jonas, Read, Timothy D., Dean, Deborah. (2016). "Dynamics of genome change among Legionella species". SCIENTIFIC REPORTS. 6():33442-33442. [doi:10.1038/srep33442]27633769
2016Gama-Castro, S., Salgado, H., Santos-Zavaleta, A., Ledezma-Tejeida, D., Muñiz-Rascado, L., García-Sotelo, J.S., Alquicira-Hernández, K., Martínez-Flores, I., Pannier, L., Castro-Mondragón, J.A., Medina-Rivera, A., Solano-Lira, H., Bonavides-Martínez, C., Pérez-Rueda, E., Alquicira-Hernández, S., Porrón-Sotelo, L., López-Fuentes, A., Hernández-Koutoucheva, A., Del Moral-Chavez, V., Rinaldi, F., Collado-Vides, J.. (2016). "RegulonDB version 9.0: High-level integration of gene regulation, coexpression, motif clustering and beyond". Nucleic Acids Research. 44(D1):133-143. [doi:10.1093/nar/gkv1156]26527724
2016Perez Carrascal, Olga M., VanInsberghe, David, Juarez, Soledad, Polz, Martin F., Vinuesa, Pablo, Gonzalez, Victor. (2016). "Population genomics of the symbiotic plasmids of sympatric nitrogen-fixing Rhizobium species associated with Phaseolus vulgaris". Environmental Microbiology. 18(8):2660-2676. [doi:10.1111/1462-2920.13415]27312778
2016Castro-Jaimes S., Salgado-Camargo A.D., Gra�a-Miraglia L., Lozano L., Bocanegra-Ibarias P., Volkow-Fern�ndez P., Silva-Sanchez J., Castillo-Ram�rez S., Cevallos M.A.. (2016). "Complete genome sequence of a multidrug-resistant Acinetobacter baumannii isolate obtained from a Mexican hospital (sequence type 422)". Microbiology Resource Announcements. 4(3):-. [doi:10.1128/genomeA.00583-16]27340065
2016Graña-Miraglia L., Lozano L., Castro-Jaimes S., Cevallos M.A., Volkow P., Castillo-Ramírez S.. (2016). "First genome sequence of a mexican multidrug-resistant Acinetobacter baumannii isolate". Microbiology Resource Announcements. 4(2):-. [doi:10.1128/genomeA.00156-16]27013043
2016Mucito-Varela E., Castillo-Rojas G., Cevallos M.A., Lozano L., Merino E., L�pez-Leal G., L�pez-Vidal Y.. (2016). "Complete genome sequence of Helicobacter Pylori strain 7C isolated from a Mexican patient with chronic gastritis". Microbiology Resource Announcements. 4(1):-. [doi:10.1128/genomeA.01503-15]26744372
2016Tamayo-Legorreta, Elsa, Turrubiartes-Martinez, Edgar, Garza-Ramos, Ulises, Nino-Moreno, Perla, Barrios, Humberto, Sanchez-Perez, Alejandro, Reyna-Flores, Fernando, Tovar-Oviedo, Juana, Magana-Aquino, Martin, Angel Cevallos, Miguel, Silva-Sanchez, Jesus. (2016). "Outbreak Caused by bla(OXA-72)-Producing Acinetobacter baumannii ST417 Detected in Clinical and Environmental Isolates". MICROBIAL DRUG RESISTANCE. 22(2):129-133. [doi:10.1089/mdr.2015.0157]26954369
2016Castillo-Ramirez, S., Fingerle, V., Jungnick, S., Straubinger, R. K., Krebs, S., Blum, H., Meinel, D. M., Hofmann, H., Guertler, P., Sing, A., Margos, G.. (2016). "Trans-Atlantic exchanges have shaped the population structure of the Lyme disease agent Borrelia burgdorferi sensu stricto". SCIENTIFIC REPORTS. 6():22794-22794. [doi:10.1038/srep22794]26955886
2016Gonzalez-Villoria, Ana M., Tamayo-Legorreta, Elsa, Garza-Ramos, Ulises, Barrios, Humberto, Sanchez-Perez, Alejandro, Rodriguez-Medina, Nadia, Uribe-Avina, Naville, Cevallos, Miguel A., Silva-Sanchez, Jesus. (2016). "A Multicenter Study in Mexico Finds Acinetobacter baumannii Clinical Isolates Belonging to Clonal Complexes 636(B) (113(B)) and 92(B) Harboring OXA-72, OXA-239, and OXA-469". Antimicrobial Agents and Chemotherapy. 60(4):2587-2588. [doi:10.1128/AAC.02042-15]26833167
2016Bolanos, Luis M., Rosenblueth, Monica, Castillo-Ramirez, Santiago, Figuier-Huttin, Gilles, Martinez-Romero, Esperanza. (2016). "Species-specific diversity of novel bacterial lineages and differential abundance of predicted pathways for toxic compound degradation in scorpion gut microbiota". Environmental Microbiology. 18(5):1364-1378. [doi:10.1111/1462-2920.12939]26058415
2015Rivera-Urbalejo, America, Perez-Oseguera, Angeles, Carreon-Rodriguez, Ofelia E., Cevallos, Miguel A.. (2015). "Mutations in an antisense RNA, involved in the replication control of a repABC plasmid, that disrupt plasmid incompatibility and mediate plasmid speciation". Plasmid. 78(SI):48-58. [doi:10.1016/j.plasmid.2015.01.004]25644116
2015Ezewudo, Matthew N., Joseph, Sandeep J., Castillo-Ramirez, Santiago, Dean, Deborah, del Rio, Carlos, Didelot, Xavier, Dillon, Jo-Anne, Selden, Richard F., Shafer, William M., Turingan, Rosemary S., Unemo, Magnus, Read, Timothy D.. (2015). "Population structure of Neisseria Gonorrhoeae based on whole genome data and its relationship with antibiotic resistance". Peerj. 2015(3):-. [doi:10.7717/peerj.806]25780762
2015Padilla, J.C.A., Bustos, P., Castro-Escarpulli, G., Sánchez-Varela, A., Palma-Martinez, I., Arzate-Barbosa, P., García-Pérez, C.A., López-López, M.d.J., González Zúñiga, Víctor Manuel, Guo, X.. (2015). "Draft genome sequence of Aeromonas caviae strain 429865 INP, isolated from a Mexican patient". Microbiology Resource Announcements. 3(5):-. [doi:10.1128/genomeA.01240-15]26494682
2015Lozano, Luis, Santamaria Gutiérrez, Rosa Isela, Bustos, P. (2015). "Genomic Tools for the Study of Azospirillum and Other Plant Growth-Promoting Rhizobacteria". Handbook for Azospirillum: Technical Issues and Protocols. ():83-97. [doi:10.1007/978-3-319-06542-7_5]
2015Ormeño-Orrillo, E., Servín-Garcidueñas, L.E., Rogel, M.A., González, V., Peralta, H., Mora, J., Martínez-Romero, J., Martinez-Romero, Esperanza. (2015). "Taxonomy of Rhizobia and agrobacteria from the Rhizobiaceae family in light of genomics". Systematic And Applied Microbiology. 38(4):287-291. [doi:10.1016/j.syapm.2014.12.002]25660942
2015Joseph, S.J., Marti, H., Didelot, X., Castillo-Ramirez, S., Read, T.D., Dean, D.. (2015). "Chlamydiaceae genomics reveals interspecies admixture and the recent evolution of Chlamydia Abortus infecting lower mammalian species and humans". Genome Biology And Evolution. 7(11):3070-3084. [doi:10.1093/gbe/evv201]26507799
2014Martinez, L.C., Martínez, I., Salgado, H., Fernández-Mora, M., Medina, A., Puente, J.L., Collado, P., Bustamante, V.H.. (2014). "In Silico identification and experimental characterization of regulatory elements controlling the expression of the Salmonella csrB and csrC genes". Journal Of Bacteriology. 196(2):325-336. [doi:10.1128/JB.00806-13]24187088
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